Research

Mechanistic and AI-Assisted Modeling for Toxicology and Therapeutic Delivery

Our research asks how environmental exposure and engineered delivery become biologically effective internal dose. We combine mechanistic modeling, experimental evidence, artificial intelligence and machine learning, and quantitative in vitro–in vivo extrapolation to connect exposure or delivery with target-tissue dose, biological interactions, and health-relevant outcomes.

Research Area 01

Mechanistic Biological Modeling for Next-Generation Risk Assessment

How can external environmental exposure be translated into human-relevant internal and target-tissue dose?

Our work develops mechanistic biological models that connect external exposure with internal and target-tissue dose. PBPK/PBTK models integrate physiology, route-specific uptake, tissue distribution, elimination, and population variability to support species extrapolation and human-relevant risk assessment.

We apply this framework to environmental contaminants including PFAS and micro/nanoplastics and integrate mechanistic modeling with IVIVE/QIVIVE, biomonitoring, Bayesian uncertainty analysis, and reverse dosimetry. The goal is to determine which exposure levels in humans correspond to experimentally observed biological effects and to improve risk assessment when direct human toxicokinetic data are limited.

Conceptual framework showing mechanistic PBPK modeling linking experimental evidence, animal-to-human extrapolation, cellular dosimetry, and human target-tissue dose for risk assessment.
Mechanistic models connect experimental evidence and environmental exposure with human internal and target-tissue dose.
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Research Area 02

AI-Enabled Predictive Toxicology

How can we make reliable toxicokinetic and toxicity predictions when chemical-specific data are sparse or complex?

We integrate machine learning with mechanistic and experimental evidence to predict toxicokinetics, toxicity, and chemical behavior when conventional data are limited. Rather than treating AI as a replacement for biological knowledge, we use interpretable and testable models to identify relationships that can inform mechanistic modeling, chemical prioritization, and experimental design.

Current applications include PBPK read-across, chemical similarity, multi-task QSAR, and machine-learning-assisted non-target analysis. Our e-cigarette research provides one example: predictive models help prioritize chemicals and transformation products, while measured aerosol concentrations and inhalation dosimetry can ultimately move the analysis from hazard prediction toward dose-informed risk assessment.

Multi-task QSAR and machine-learning framework for predicting multiple toxicity endpoints of chemicals associated with e-cigarette products.
AI and machine learning integrate chemical information and experimental data to support predictive toxicology under data-limited conditions.
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Research Area 03

Nano-Bio Interactions & Nanomedicine

Which nano-bio interactions determine nanoparticle biological identity, disposition, and therapeutic delivery?

Nanoparticles acquire a biological identity after entering biological fluids, and that identity can alter cellular recognition, uptake, clearance, tissue distribution, and off-target exposure. Our laboratory studies these nano-bio interactions, with particular emphasis on the protein corona and its relationship to nanoparticle fate.

We combine curated experimental data, interpretable machine learning, cellular measurements, and PBPK modeling to determine when biological interaction measurements improve predictions beyond engineered formulation properties alone. This framework is being extended to lipid nanoparticles and tumor delivery, where in vitro kinetic phenotypes and nano-bio measurements can be evaluated as mechanistically meaningful information for PBPK–IVIVE and prospective formulation testing.

Conceptual nanomedicine framework linking nanoparticle formulation and protein-corona measurements with AI-assisted prediction of PBPK parameters, tissue distribution, and delivery.
Nano-bio measurements are integrated with mechanistic and data-driven models to understand nanoparticle fate and improve delivery predictions.
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Research Area 04

Biomaterials & Regional Drug Delivery

How do material properties, release kinetics, and administration strategies shape regional exposure and biological response?

This research direction examines how biomaterial properties, release kinetics, and administration procedures influence target-tissue exposure and biological response. Our contribution is to make the relationship between material or device design choices and biological outcomes quantitatively explicit and experimentally testable.

Current collaborative programs include AI-guided biomaterial design and regional drug-delivery modeling. In biomaterials, active-learning approaches can prioritize informative formulations by integrating material characterization with biological measurements. In regional delivery, PBPK models connect device release, regional input, whole-body disposition, and target-versus-peripheral exposure. Related work extends these concepts to brain-targeted delivery and biological barriers such as the blood-brain barrier.

Regional drug-delivery framework connecting device release and intra-arterial administration with tissue concentration measurements and whole-body PBPK modeling.
Mechanistic modeling connects material and device design with regional input, whole-body disposition, and target-tissue exposure.
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